-- | --

IDCP970_02565 TypeCDS
From647639 nt length615
To648253 aa length204
Gene pI6.75
DefinitionXRE family transcriptional regulator M.W (Da)22526
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO0376 putative transcriptional regulator3322.0e-118
sgrSGR_6926 putative transcriptional regulator3268.0e-116

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix16-7054.96.8e-15

HTH_311Helix-turn-helix domain15-7047.61.6e-12

Cupin_21Cupin domain119-17234.99.5e-09

HTH_191Helix-turn-helix domain14-7134.02.4e-08

HTH_261Cro/C1-type HTH DNA-binding domain15-7233.54.4e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
ATL32523.1 hypothetical protein KY5_7505c [Streptomyces formicae] 9441.1e-128
WP_150220701.1 helix-turn-helix domain-containing protein [Streptomyces ven... 9333.5e-127
PWE12304.1 XRE family transcriptional regulator [Streptomyces sp. BSE7F] 9317.2e-127
WP_102637153.1 MULTISPECIES: helix-turn-helix domain-containing protein [Ac... 9318.5e-127
WP_093838117.1 helix-turn-helix domain-containing protein [Streptomyces aid... 9273.2e-126
WP_059414912.1 helix-turn-helix domain-containing protein [Streptomyces azu... 9264.2e-126
WP_176573476.1 helix-turn-helix domain-containing protein [Nonomuraea pusil... 9265.0e-126
WP_111664842.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9265.1e-126
WP_055506030.1 helix-turn-helix domain-containing protein [Nonomuraea pusil... 9258.3e-126
WP_119992000.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9241.1e-125

PSORT result

LocalizationCertaintyPSORT said
Not Clear