-- | --

IDCP970_04355 TypeCDS
From1169643 nt length636
To1169008 aa length211
Gene pI6.14
DefinitionXRE family transcriptional regulator M.W (Da)22403
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1644 putative regulatory protein3303.0e-117
coelSCO6770 putative DNA-binding protein3031.0e-106
sgrSGR_958 putative transcriptional regulator2622.0e-90

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain23-8058.66.1e-16

HTH_31Helix-turn-helix26-8050.51.6e-13

Cupin_21Cupin domain121-18950.11.7e-13

HTH_191Helix-turn-helix domain26-8134.61.5e-08

HTH_261Cro/C1-type HTH DNA-binding domain26-8124.43e-05

AraC_binding1AraC-like ligand binding domain134-18622.58.2e-05

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098246163.1 helix-turn-helix domain-containing protein [Streptomyces for... 9233.6e-125
WP_127909532.1 helix-turn-helix domain-containing protein [Streptomyces hua... 8876.1e-120
WP_125516390.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 8818.3e-119
WP_055697314.1 helix-turn-helix domain-containing protein [Streptomyces sil... 8781.8e-118
WP_069885375.1 helix-turn-helix domain-containing protein [Streptomyces lut... 8781.9e-118
WP_150174625.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 8679.6e-117
WP_150187319.1 helix-turn-helix domain-containing protein [Streptomyces ven... 8557.0e-115
WP_055529269.1 helix-turn-helix domain-containing protein [Streptomyces alb... 8548.0e-115
WP_150214783.1 helix-turn-helix domain-containing protein [Streptomyces ven... 8531.3e-114
WP_055563777.1 helix-turn-helix domain-containing protein [Streptomyces atr... 8504.0e-114

PSORT result

LocalizationCertaintyPSORT said
Not Clear