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IDCP970_04405 TypeCDS
From1182520 nt length897
To1181624 aa length298
GenehpnC pI5.44
Definitionsqualene synthase HpnC M.W (Da)32451
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1654 squalene/phytoene synthase4563.0e-164
coelSCO6759 putative phytoene synthase4465.0e-160
sgrSGR_966 putative squalene/phytoene synthase4543.0e-163

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SQS_PSY1Squalene/phytoene synthase17-283224.81.3e-66

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098246154.1 squalene synthase HpnC [Streptomyces formicae] >gb 13830.0e+00
WP_160508734.1 squalene synthase HpnC [Streptomyces sp. BA2] >gb 12892.8e-178
WP_135329575.1 squalene synthase HpnC [Streptomyces sp. MZ04] >lcl 12556.4e-173
WP_127826520.1 squalene synthase HpnC [Streptomyces sp. San01] >gb 12061.4e-165
WP_157166794.1 squalene synthase HpnC [Streptomyces sp. p1417] >gb 12043.0e-165
WP_058851459.1 squalene synthase HpnC [Streptomyces silvensis] >gb 11835.3e-162
WP_100591833.1 squalene synthase HpnC [Streptomyces sp. CB01635] >gb 11741.2e-160
RAJ91524.1 squalene synthase HpnC [Streptomyces sp. PsTaAH-137] 11713.0e-160
WP_111661201.1 MULTISPECIES: squalene synthase HpnC [unclassified Streptomy... 11713.1e-160
WP_161303705.1 squalene synthase HpnC [Streptomyces sp. SID5785] >gb 11696.6e-160

PSORT result

LocalizationCertaintyPSORT said
Not Clear