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IDCP970_05725 TypeCDS
From1499946 nt length843
To1500788 aa length280
Gene pI5.85
DefinitionXRE family transcriptional regulator M.W (Da)30846
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1860 putative DNA-binding protein3995.0e-142
coelSCO6539 hypothetical protein4063.0e-145
sgrSGR_1133 putative DNA-binding protein3505.0e-123

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MLTR_LBD1MmyB-like transcription regulator ligand binding domain106-277115.33.1e-33

HTH_311Helix-turn-helix domain23-8248.77.3e-13

HTH_31Helix-turn-helix26-7839.35.1e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245941.1 helix-turn-helix domain-containing protein [Streptomyces for... 13740.0e+00
WP_150477574.1 helix-turn-helix domain-containing protein [Streptomyces alb... 12516.8e-173
WP_030791936.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12463.9e-172
WP_125516241.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 12402.6e-171
WP_079107458.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 12325.0e-170
WP_079249913.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 12282.0e-169
WP_127909275.1 helix-turn-helix transcriptional regulator [Streptomyces hua... 12264.1e-169
WP_079036643.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 12264.7e-169
WP_150187148.1 helix-turn-helix domain-containing protein [Streptomyces ven... 12059.0e-166
WP_079075116.1 helix-turn-helix domain-containing protein [Streptomyces atr... 12031.4e-165

PSORT result

LocalizationCertaintyPSORT said
Not Clear