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IDCP970_10040 TypeCDS
From2527075 nt length1278
To2528352 aa length425
Gene pI5.1
Definitionribonuclease D M.W (Da)45440
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2231 putative ribonuclease D6720.0e+00
coelSCO6028 hypothetical protein6470.0e+00
sgrSGR_1476 putative ribonuclease D5790.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol_A_exo113'-5' exonuclease46-209120.18.7e-35

DNA_pol_A_exoN13' to 5' exonuclease C-terminal domain338-424111.02.5e-32

HRDC1HRDC domain251-31752.05.2e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245389.1 ribonuclease D [Streptomyces formicae] >gb 17950.0e+00
WP_125515664.1 ribonuclease D [Streptomyces sp. WAC 01529] >gb 17110.0e+00
WP_055531024.1 ribonuclease D [Streptomyces alboniger] >gb 17080.0e+00
WP_150173404.1 MULTISPECIES: HRDC domain-containing protein [Streptomyces] ... 16820.0e+00
WP_055698707.1 MULTISPECIES: ribonuclease D [Streptomyces] 16810.0e+00
WP_030779786.1 ribonuclease D [Streptomyces sp. NRRL S-920] 16790.0e+00
MPY56884.1 ribonuclease D [Streptomyces spongiae] 16780.0e+00
WP_062770679.1 MULTISPECIES: ribonuclease D [Streptomyces] >gb 16760.0e+00
WP_150186750.1 HRDC domain-containing protein [Streptomyces venezuelae] >gb... 16750.0e+00
WP_150215597.1 HRDC domain-containing protein [Streptomyces venezuelae] >gb... 16710.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear