ID	CP970_11610	Type	CDS
From	2897041	nt length	5493
To	2891549	aa length	1830
Gene		pI	4.67
Definition	HAMP domain-containing protein	M.W (Da)	196134
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	HAMP	11	HAMP domain	39-79, 225-275, 316-367, 411-459, 503-551, 592-643, 685-735, 777-827, 868-919, 962-1011, 1053-1104	332.6	1.6e-101
	HAMP_2	8	HAMP domain	212-274, 397-458, 488-550, 580-642, 672-734, 764-826, 948-1010, 1040-1102	298.8	4.6e-91
	HATPase_c	1	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	1476-1608	100.5	7.6e-29
	Response_reg	1	Response regulator receiver domain	1711-1822	93.9	6.9e-27
	HisKA	1	His Kinase A (phospho-acceptor) domain	1362-1429	63.5	1.4e-17
	GAF_2	1	GAF domain	1130-1274	60.4	2.3e-16
	GAF	1	GAF domain	1131-1275	39.1	1e-09

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_098245126.1	HAMP domain-containing protein [Streptomyces formicae] >gb	8644	0.0e+00
WP_150172909.1	HAMP domain-containing protein [Streptomyces venezuelae] >gb...	8532	0.0e+00
WP_150186537.1	HAMP domain-containing protein [Streptomyces venezuelae] >gb...	8529	0.0e+00
WP_150215848.1	HAMP domain-containing protein [Streptomyces venezuelae] >gb...	8503	0.0e+00
AZM55897.1	hybrid sensor histidine kinase/response regulator [Streptomyces s...	8484	0.0e+00
QEV20619.1	HAMP domain-containing protein [Streptomyces alboniger]	8473	0.0e+00
WP_106976958.1	HAMP domain-containing protein [Streptomyces sp. NRRL S-920]	8456	0.0e+00
WP_107117843.1	HAMP domain-containing protein [Streptomyces sp. NRRL S-1521...	8372	0.0e+00
AYA16419.1	HAMP domain-containing protein [Streptomyces fradiae] >gb	8367	0.0e+00
WP_164441066.1	HAMP domain-containing protein [Streptomyces sp. SID339] >gb...	8360	0.0e+00

PSORT result

Localization	Certainty	PSORT said
Not Clear

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