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IDCP970_11655 TypeCDS
From2908448 nt length1686
To2906763 aa length561
Gene pI6.17
Definitionribonuclease J M.W (Da)60950
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2515 putative hydrolase of the metallo-beta-lactamase superfamily10670.0e+00
coelSCO5745 hypothetical protein10690.0e+00
sgrSGR_1775 putative hydrolase of the metallo-beta-lactamase superfamily10490.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNase_J_C1Ribonuclease J C-terminal domain464-56174.89.2e-21

Lactamase_B1Metallo-beta-lactamase superfamily28-17450.03.5e-13

RMMBL1Zn-dependent metallo-hydrolase RNA specificity domain370-41244.21.4e-11

Lactamase_B_21Beta-lactamase superfamily domain70-17439.25.2e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245123.1 ribonuclease J [Streptomyces formicae] >gb 29110.0e+00
WP_055568712.1 ribonuclease J [Streptomyces atriruber] 28970.0e+00
WP_150172903.1 MULTISPECIES: RNase J family beta-CASP ribonuclease [Strepto... 28940.0e+00
WP_150215850.1 RNase J family beta-CASP ribonuclease [Streptomyces venezuel... 28880.0e+00
WP_150186533.1 RNase J family beta-CASP ribonuclease [Streptomyces venezuel... 28810.0e+00
WP_030784327.1 ribonuclease J [Streptomyces sp. NRRL S-920] 28760.0e+00
WP_055531426.1 ribonuclease J [Streptomyces alboniger] >gb 28750.0e+00
WP_160507562.1 RNase J family beta-CASP ribonuclease [Streptomyces sp. BA2]... 28690.0e+00
WP_125515452.1 ribonuclease J [Streptomyces sp. WAC 01529] >gb 28590.0e+00
WP_127911229.1 ribonuclease J [Streptomyces huasconensis] 28550.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear