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IDCP970_12180 TypeCDS
From3024113 nt length600
To3023514 aa length199
GenerimM pI4
Definitionribosome maturation factor RimM M.W (Da)21396
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2642 putative 16S rRNA processing protein3321.0e-118
coelSCO5593 hypothetical protein3163.0e-112
sgrSGR_1887 putative 16S rRNA processing protein2892.0e-101

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RimM1RimM N-terminal domain4-8378.33.9e-22

PRC1PRC-barrel domain93-16637.32.2e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245045.1 ribosome maturation factor RimM [Streptomyces formicae] >gb 7231.5e-95
WP_093722141.1 ribosome maturation factor RimM [Streptomyces sp. DI166] >em... 7252.0e-95
WP_125515358.1 ribosome maturation factor RimM [Streptomyces sp. WAC 01529]... 7233.0e-95
WP_099931568.1 ribosome maturation factor RimM [Streptomyces sp. 70] >gb 7188.4e-95
WP_127829942.1 ribosome maturation factor RimM [Streptomyces sp. San01] >gb... 7181.5e-94
WP_135334709.1 ribosome maturation factor RimM [Streptomyces sp. MZ04] >lcl... 7171.5e-94
WP_055701858.1 MULTISPECIES: ribosome maturation factor RimM [Streptomyces] 7181.7e-94
WP_160507456.1 ribosome maturation factor RimM [Streptomyces sp. BA2] >gb 7162.1e-94
WP_164320089.1 ribosome maturation factor RimM [Streptomyces aureoverticill... 7153.3e-94
WP_055529870.1 ribosome maturation factor RimM [Streptomyces alboniger] >gb... 7154.5e-94

PSORT result

LocalizationCertaintyPSORT said
Not Clear