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IDCP970_12185 TypeCDS
From3024465 nt length240
To3024226 aa length79
Gene pI10.65
DefinitionRNA-binding protein M.W (Da)8674
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2643 hypothetical protein1445.0e-48
coelSCO5592 hypothetical protein1468.0e-49
sgrSGR_1888 conserved hypothetical protein1445.0e-48

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

KH_41KH domain3-6568.92.7e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_003958958.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 2759.2e-31
WP_146469501.1 RNA-binding protein [Streptomyces misionensis] >lcl 2741.2e-30
WP_005311361.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 2741.2e-30
WP_176180406.1 RNA-binding protein [Streptomyces sp. NA02950] >gb 2741.2e-30
WP_064070304.1 RNA-binding protein [Streptomyces albulus] >gb 2741.2e-30
WP_030267150.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 2741.2e-30
WP_014176063.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 2741.2e-30
WP_040247777.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 2741.3e-30
WP_030361979.1 MULTISPECIES: RNA-binding protein [Streptomyces] >gb 2741.4e-30
WP_018850017.1 RNA-binding protein [Streptomyces sp. CNT372] 2741.4e-30

PSORT result

LocalizationCertaintyPSORT said
Not Clear