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IDCP970_12265 TypeCDS
From3049474 nt length3555
To3045920 aa length1184
Genesmc pI5.03
Definitionchromosome segregation protein SMC M.W (Da)128586
Note AseI frg.
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2658 putative chromosome segregation protein17850.0e+00
coelSCO5577 putative chromosome associated protein17380.0e+00
sgrSGR_1901 putative chromosome segregation protein16470.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_N1RecF/RecN/SMC N terminal domain3-1176240.51.4e-71

SMC_hinge1SMC proteins Flexible Hinge Domain512-62184.66.1e-24

AAA_212AAA domain, putative AbiEii toxin, Type IV TA system26-83, 1091-115561.51.1e-16

AAA_231AAA domain6-25258.11.6e-15

AAA_151AAA ATPase domain1-5145.96.1e-12

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245030.1 chromosome segregation protein SMC [Streptomyces formicae] >... 37500.0e+00
WP_125515344.1 chromosome segregation protein SMC [Streptomyces sp. WAC 015... 35940.0e+00
WP_055698120.1 chromosome segregation protein SMC [Streptomyces silaceus] 35850.0e+00
WP_069884991.1 chromosome segregation protein SMC [Streptomyces luteocolor] 35800.0e+00
WP_055564483.1 chromosome segregation protein SMC [Streptomyces atriruber] 35620.0e+00
WP_076684306.1 MULTISPECIES: chromosome segregation protein SMC [Streptomyc... 35500.0e+00
WP_062779325.1 chromosome segregation protein SMC [Streptomyces sp. NRRL S-... 35440.0e+00
WP_136241676.1 chromosome segregation protein SMC [Streptomyces sp. A1499] ... 35430.0e+00
WP_030361963.1 MULTISPECIES: chromosome segregation protein SMC [Streptomyc... 35080.0e+00
WP_125261840.1 chromosome segregation protein SMC [Streptomyces alboflavus] 35060.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear