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IDCP970_12290 TypeCDS
From3052933 nt length861
To3052073 aa length286
Gene pI9.14
Definitionbifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase M.W (Da)32171
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2664 putative formamidopyrimidine-DNA glycosylase4947.0e-180
coelSCO5573 formamidopyrimidine-DNA glycosylase4953.0e-180
sgrSGR_1907 putative formamidopyrimidine-DNA glycosylase4911.0e-178

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Fapy_DNA_glyco1Formamidopyrimidine-DNA glycosylase N-terminal domain1-121121.52.9e-35

H2TH1Formamidopyrimidine-DNA glycosylase H2TH domain139-22781.63.1e-23

zf-FPG_IleRS1Zinc finger found in FPG and IleRS253-27927.91.6e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098245024.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 14890.0e+00
WP_150215983.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 14070.0e+00
WP_055698162.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 14000.0e+00
WP_055564479.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 14000.0e+00
WP_076684308.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 13940.0e+00
WP_062779312.1 MULTISPECIES: bifunctional DNA-formamidopyrimidine glycosyla... 13910.0e+00
WP_055526855.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13800.0e+00
WP_127912080.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13780.0e+00
WP_030787531.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13710.0e+00
WP_165335403.1 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurin... 13680.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear