-- | --

IDCP970_12845 TypeCDS
From3182431 nt length2184
To3180248 aa length727
GeneligA pI4.92
DefinitionNAD-dependent DNA ligase LigA M.W (Da)80281
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2748 putative DNA ligase13130.0e+00
coelSCO5494 SC8D9.06 putative DNA ligase11880.0e+00
sgrSGR_2021 putative DNA ligase12440.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_ligase_aden1NAD-dependent DNA ligase adenylation domain12-325415.41.4e-124

DNA_ligase_OB1NAD-dependent DNA ligase OB-fold domain329-40599.86.1e-29

HHH_21Helix-hairpin-helix motif553-61680.29.3e-23

BRCT1BRCA1 C Terminus (BRCT) domain637-70750.22.6e-13

DNA_ligase_ZBD1NAD-dependent DNA ligase C4 zinc finger domain414-44234.21.9e-08

PTCB-BRCT1twin BRCT domain644-70331.81.1e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098244938.1 NAD-dependent DNA ligase LigA [Streptomyces formicae] >gb 37200.0e+00
WP_055568898.1 NAD-dependent DNA ligase LigA [Streptomyces atriruber] 36100.0e+00
WP_150172519.1 MULTISPECIES: NAD-dependent DNA ligase LigA [Streptomyces] >... 36070.0e+00
WP_150186359.1 NAD-dependent DNA ligase LigA [Streptomyces venezuelae] >gb 36040.0e+00
WP_125515252.1 NAD-dependent DNA ligase LigA [Streptomyces sp. WAC 01529] >... 35990.0e+00
WP_055697811.1 NAD-dependent DNA ligase LigA [Streptomyces silaceus] 35610.0e+00
WP_069884932.1 NAD-dependent DNA ligase LigA [Streptomyces luteocolor] 35610.0e+00
WP_055534339.1 NAD-dependent DNA ligase LigA [Streptomyces alboniger] >gb 35560.0e+00
WP_076684361.1 MULTISPECIES: NAD-dependent DNA ligase LigA [Streptomyces] >... 35530.0e+00
WP_062771259.1 MULTISPECIES: NAD-dependent DNA ligase LigA [unclassified St... 35520.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear