-- | --

IDCP970_13875 TypeCDS
From3422772 nt length1920
To3424691 aa length639
Gene pI9.58
Definitiontype IV secretion protein Rhs M.W (Da)66726
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO4246 hypothetical protein5570.0e+00
sgrSGR_2073 conserved hypothetical protein3537.0e-115

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Phage_base_V1Type VI secretion system/phage-baseplate injector OB domain381-45272.23.3e-20

Phage_GPD1Phage late control gene D protein (GPD)81-34249.63.3e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098244773.1 VgrG-related protein [Streptomyces formicae] >gb 29960.0e+00
WP_069886508.1 VgrG-related protein [Streptomyces luteocolor] 28170.0e+00
WP_055702948.1 VgrG-related protein [Streptomyces silaceus] 28170.0e+00
WP_150186693.1 VgrG-related protein [Streptomyces venezuelae] >gb 27920.0e+00
WP_150173255.1 MULTISPECIES: VgrG-related protein [Streptomyces] >gb 27800.0e+00
WP_150215655.1 VgrG-related protein [Streptomyces venezuelae] >gb 27740.0e+00
WP_125515609.1 VgrG-related protein [Streptomyces sp. WAC 01529] >gb 27500.0e+00
WP_055568039.1 VgrG-related protein [Streptomyces atriruber] 27470.0e+00
WP_030792197.1 VgrG-related protein [Streptomyces sp. NRRL S-920] 27440.0e+00
WP_055536030.1 VgrG-related protein [Streptomyces alboniger] >gb 27410.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear