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IDCP970_14895 TypeCDS
From3652473 nt length759
To3651715 aa length252
GenesigE pI8.94
DefinitionRNA polymerase sigma factor SigE M.W (Da)27721
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3117 putative RNA polymerase ECF-subfamily sigma factor3878.0e-139
coelSCO5147 putative ECF-subfamily sigma factor3825.0e-137
sgrSGR_2378 putative RNA polymerase ECF-subfamily sigma factor3961.0e-142

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 270-13573.49.8e-21

Sigma70_r4_21Sigma-70, region 4168-21960.78.1e-17

Sigma70_r41Sigma-70, region 4172-22149.12.9e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_078594836.1 MULTISPECIES: RNA polymerase sigma factor SigE [Streptomyces... 10103.3e-137
WP_079037092.1 MULTISPECIES: RNA polymerase sigma factor SigE [Streptomyces... 10093.9e-137
WP_150171910.1 MULTISPECIES: RNA polymerase sigma factor SigE [Streptomyces... 10074.9e-137
WP_098247498.1 RNA polymerase sigma factor SigE [Streptomyces formicae] 10086.2e-137
APY86508.1 RNA polymerase sigma factor SigE [Streptomyces alfalfae] >gb 10051.6e-136
WP_175613562.1 RNA polymerase sigma factor SigE [Streptomyces huasconensis] 10061.6e-136
WP_079075110.1 RNA polymerase sigma factor SigE [Streptomyces atriruber] 10014.4e-136
WP_125517990.1 RNA polymerase sigma factor SigE [Streptomyces sp. WAC 01529... 9997.3e-136
WP_164320985.1 RNA polymerase sigma factor SigE [Streptomyces aureoverticil... 9936.6e-135
WP_078619459.1 MULTISPECIES: RNA polymerase sigma factor SigE [Streptomyces... 9956.8e-135

PSORT result

LocalizationCertaintyPSORT said
Not Clear