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IDCP970_15850 TypeCDS
From3863772 nt length336
To3863437 aa length111
Gene pI10.93
DefinitionXRE family transcriptional regulator M.W (Da)12149
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1148 putative DNA-binding protein1171.0e-35
coelSCO7279 possible DNA-binding protein977.0e-28
sgrSGR_2603 putative DNA-binding protein988.0e-28

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_311Helix-turn-helix domain25-8141.99.6e-11

HTH_31Helix-turn-helix28-8140.32.4e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
ATL30107.1 HigA protein (antitoxin to HigB) [Streptomyces formicae] 3556.6e-42
WP_125514688.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 3029.0e-34
WP_055528478.1 helix-turn-helix transcriptional regulator [Streptomyces alb... 3001.4e-33
WP_055565140.1 helix-turn-helix transcriptional regulator [Streptomyces atr... 3011.4e-33
WP_150171478.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 2993.2e-33
WP_062770942.1 MULTISPECIES: helix-turn-helix transcriptional regulator [un... 2951.1e-32
WP_076684828.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 2951.1e-32
WP_150216502.1 helix-turn-helix domain-containing protein [Streptomyces ven... 2932.4e-32
WP_150188417.1 helix-turn-helix domain-containing protein [Streptomyces ven... 2871.3e-31
WP_055697697.1 MULTISPECIES: helix-turn-helix transcriptional regulator [St... 2812.2e-30

PSORT result

LocalizationCertaintyPSORT said
Not Clear