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IDCP970_16255 TypeCDS
From3942618 nt length840
To3943457 aa length279
Gene pI9.8
DefinitionXRE family transcriptional regulator M.W (Da)30874
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5197 putative DNA-binding protein1276.0e-36
coelSCO2869 putative regulatory protein1234.0e-34
sgrSGR_7135t putative DNA-binding protein1087.0e-29

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF57531Domain of unknown function (DUF5753)103-26692.22.9e-26

HTH_311Helix-turn-helix domain14-7445.28.9e-12

HTH_31Helix-turn-helix19-7033.43.5e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_101389783.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 11421.7e-156
WP_067163448.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 10572.3e-143
WP_159508431.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9868.8e-133
WP_030408350.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9642.6e-129
WP_031506487.1 helix-turn-helix domain-containing protein [Streptomyces meg... 9461.3e-126
WP_093491840.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9363.4e-125
WP_088799721.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9312.7e-124
WP_058943293.1 helix-turn-helix domain-containing protein [Streptomyces kan... 9312.7e-124
WP_093648657.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 9252.0e-123
WP_071268682.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 9164.7e-122

PSORT result

LocalizationCertaintyPSORT said
Not Clear