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IDCP970_18245 TypeCDS
From4357544 nt length204
To4357747 aa length67
Gene pI4.48
Definitioncold-shock protein M.W (Da)7148
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4820 putative cold shock protein1351.0e-44
coelSCO4505 scoF2 cold shock protein1321.0e-43
sgrSGR_3002 putative cold shock protein1301.0e-42

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-66110.23.3e-32

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_006138897.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3492.2e-42
WP_067282429.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 3459.3e-42
WP_030379745.1 MULTISPECIES: cold-shock protein [unclassified Streptomyces]... 3431.6e-41
WP_037627265.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3431.6e-41
WP_018528239.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3422.1e-41
WP_148009945.1 MULTISPECIES: cold shock domain-containing protein [unclassi... 3422.7e-41
WP_053740801.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 3414.1e-41
WP_077968889.1 cold-shock protein [Streptomyces tsukubensis] >gb 3404.4e-41
WP_003948780.1 MULTISPECIES: cold-shock protein [Terrabacteria group] >gb 3404.9e-41
WP_003998944.1 MULTISPECIES: cold-shock protein [Streptomycetaceae] >gb 3405.4e-41

PSORT result

LocalizationCertaintyPSORT said
Not Clear