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IDCP970_18750 TypeCDS
From4464769 nt length795
To4465563 aa length264
Gene pI8.89
Definitionsigma-70 family RNA polymerase sigma factor M.W (Da)28750
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4735 putative RNA polymerase ECF-subfamily sigma factor (BldN)4524.0e-164
coelSCO3323 putative RNA polymerase sigma factor3521.0e-125
sgrSGR_4151 RNA polymerase ECF-subfamily sigma factor4712.0e-171

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 2105-17264.45.9e-18

Sigma70_r4_21Sigma-70, region 4204-25550.89.5e-14

Sigma70_r41Sigma-70, region 4210-25538.37e-10

Sigma70_ECF1ECF sigma factor88-24535.87.5e-09

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_150170714.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 9585.4e-129
WP_055566626.1 sigma-70 family RNA polymerase sigma factor [Streptomyces at... 9542.4e-128
WP_150217038.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ve... 9533.6e-128
WP_030791709.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 9463.6e-127
WP_127909244.1 sigma-70 family RNA polymerase sigma factor [Streptomyces hu... 9463.9e-127
WP_125514319.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 9455.1e-127
WP_055534167.1 sigma-70 family RNA polymerase sigma factor [Streptomyces al... 9386.6e-126
WP_098244036.1 sigma-70 family RNA polymerase sigma factor [Streptomyces fo... 9371.5e-125
WP_055699157.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 9352.0e-125
WP_150185516.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ve... 9352.0e-125

PSORT result

LocalizationCertaintyPSORT said
Not Clear