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IDCP970_18775 TypeCDS
From4469986 nt length246
To4469741 aa length81
Gene pI9.77
Definitionhelix-turn-helix domain-containing protein M.W (Da)9174
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4731 hypothetical protein1402.0e-46
coelSCO3328 hypothetical protein1282.0e-41
sgrSGR_4146 conserved hypothetical protein1374.0e-45

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_171Helix-turn-helix domain25-7352.34.7e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055566622.1 helix-turn-helix domain-containing protein [Streptomyces ven... 4155.1e-52
APY87034.1 transcriptional regulator [Streptomyces alfalfae] >gb 4078.7e-51
WP_009716039.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 3842.4e-47
WP_086019609.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 3756.4e-46
ASQ96141.1 transcriptional regulator [Streptomyces sp. 11-1-2] 3722.0e-45
BBJ41946.1 hypothetical protein SSPO_046640 [Streptomyces antimycoticus] >d... 3713.7e-45
OAH09338.1 helix-turn-helix domain protein [Streptomyces jeddahensis] 3694.8e-45
WP_100452095.1 helix-turn-helix domain-containing protein [Streptomyces gri... 3686.7e-45
WP_003980932.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3687.5e-45
WP_010639118.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 3661.3e-44

PSORT result

LocalizationCertaintyPSORT said
Not Clear