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IDCP970_21750 TypeCDS
From5105474 nt length1737
To5107210 aa length578
Gene pI4.8
DefinitionGAF domain-containing protein M.W (Da)61573
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4257 putative two-component system sensor kinase8350.0e+00
coelSCO3948 putative two component sensor7800.0e+00
sgrSGR_3643 putative two-component system sensor kinase8760.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

GAF_22GAF domain56-195, 225-359124.73.3e-36

GAF2GAF domain56-195, 226-359105.92.4e-30

GAF_31GAF domain227-35956.24.3e-15

HisKA_31Histidine kinase377-43840.62.8e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243583.1 GAF domain-containing protein [Streptomyces formicae] >gb 26270.0e+00
WP_055699856.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] 25450.0e+00
WP_055568268.1 GAF domain-containing protein [Streptomyces atriruber] 25200.0e+00
WP_125517861.1 GAF domain-containing protein [Streptomyces sp. WAC 01529] >... 24970.0e+00
WP_150221269.1 GAF domain-containing protein [Streptomyces venezuelae] >gb 24860.0e+00
WP_150175729.1 MULTISPECIES: GAF domain-containing protein [Streptomyces] >... 24850.0e+00
WP_164323067.1 GAF domain-containing protein [Streptomyces aureoverticillat... 24830.0e+00
WP_160506057.1 GAF domain-containing protein [Streptomyces sp. BA2] >gb 24750.0e+00
WP_150188308.1 GAF domain-containing protein [Streptomyces venezuelae] >gb 24620.0e+00
WP_135331334.1 GAF domain-containing protein [Streptomyces sp. MZ04] >lcl 24370.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear