ID	CP970_22230	Type	CDS
From	5202643	nt length	864
To	5201780	aa length	287
Gene		pI	4.74
Definition	RNA polymerase sigma factor SigF	M.W (Da)	31737
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4	1	Sigma-70, region 4	233-282	71.6	2.9e-20
	Sigma70_r2	1	Sigma-70 region 2	66-135	62.5	2.4e-17
	Sigma70_r3	1	Sigma-70 region 3	147-205	44.9	9.3e-12
	Sigma70_r4_2	1	Sigma-70, region 4	233-280	38.7	6e-10

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_098243521.1	RNA polymerase sigma factor SigF [Streptomyces formicae] >gb...	1306	0.0e+00
WP_055566604.1	RNA polymerase sigma factor SigF [Streptomyces atriruber]	1292	4.3e-179
WP_055700245.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1288	1.8e-178
WP_150169731.1	MULTISPECIES: SigB/SigF/SigG family RNA polymerase sigma fac...	1288	2.1e-178
WP_127911206.1	RNA polymerase sigma factor SigF [Streptomyces huasconensis]	1272	9.3e-176
WP_055528576.1	RNA polymerase sigma factor SigF [Streptomyces alboniger] >g...	1271	1.3e-175
WP_125513837.1	RNA polymerase sigma factor SigF [Streptomyces sp. WAC 01529...	1270	2.0e-175
WP_062780947.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1266	4.1e-175
WP_030780399.1	RNA polymerase sigma factor SigF [Streptomyces sp. NRRL S-92...	1268	4.6e-175
WP_030357898.1	MULTISPECIES: RNA polymerase sigma factor SigF [Streptomyces...	1246	5.9e-172

PSORT result

Localization	Certainty	PSORT said
Not Clear

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