ID	CP970_23150	Type	CDS
From	5392905	nt length	660
To	5392246	aa length	219
Gene		pI	10.55
Definition	RNA polymerase sigma factor	M.W (Da)	24315
Note		AseI frg.
SignalP v.4.0	Non-secretory protein | plot	Category

Orthologs (if any)

Pfam search result

	Model	No.	Description	Position (aa)	Score	E-value
	Sigma70_r4_2	1	Sigma-70, region 4	117-168	59.6	1.7e-16
	Sigma70_r2	1	Sigma-70 region 2	16-84	49.8	2.2e-13
	Sigma70_r4	1	Sigma-70, region 4	121-170	43.8	1.3e-11

BLAST search result (top 10 hits)

ID	Description	Score	E-value
WP_098247355.1	RNA polymerase sigma factor [Streptomyces formicae]	834	1.7e-111
ATL28839.1	hypothetical protein KY5_3821 [Streptomyces formicae]	833	3.2e-111
WP_055699544.1	MULTISPECIES: RNA polymerase sigma factor [Streptomyces]	683	1.2e-88
WP_148901429.1	sigma-70 family RNA polymerase sigma factor [Streptomyces pa...	625	7.6e-80
WP_093811544.1	RNA polymerase sigma factor [Streptomyces sp. Ncost-T6T-1] >...	621	2.5e-79
WP_032781934.1	RNA polymerase sigma factor [Streptomyces albus]	618	7.2e-79
WP_073960800.1	RNA polymerase sigma factor [Streptomyces sp. TSRI0395] >gb	618	7.7e-79
WP_032766933.1	MULTISPECIES: RNA polymerase sigma factor [unclassified Stre...	617	1.1e-78
WP_175516005.1	sigma-70 family RNA polymerase sigma factor [Streptomyces sp...	617	1.1e-78
WP_164199992.1	sigma-70 family RNA polymerase sigma factor [Streptomyces pa...	617	1.2e-78

PSORT result

Localization	Certainty	PSORT said
Not Clear

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