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IDCP970_23505 TypeCDS
From5463034 nt length462
To5463495 aa length153
Gene pI4.47
Definitionhelix-turn-helix domain-containing protein M.W (Da)16877
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4012 putative DNA-binding protein2346.0e-81
coelSCO4198 putative DNA-binding protein2162.0e-74
sgrSGR_3987 putative DNA-binding protein1964.0e-66

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_31Helix-turn-helix13-6555.35.3e-15

HTH_311Helix-turn-helix domain9-6552.93.6e-14

HTH_191Helix-turn-helix domain10-6940.52.2e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243379.1 helix-turn-helix domain-containing protein [Streptomyces for... 7446.6e-100
WP_160505815.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 6606.0e-87
WP_030784772.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6562.6e-86
WP_055702226.1 helix-turn-helix transcriptional regulator [Streptomyces sil... 6543.1e-86
WP_055534119.1 helix-turn-helix transcriptional regulator [Streptomyces alb... 6535.5e-86
WP_069887127.1 helix-turn-helix transcriptional regulator [Streptomyces lut... 6491.3e-85
WP_125513647.1 helix-turn-helix transcriptional regulator [Streptomyces sp.... 6501.4e-85
WP_127912844.1 helix-turn-helix transcriptional regulator [Streptomyces hua... 6457.1e-85
WP_055565900.1 helix-turn-helix transcriptional regulator [Streptomyces atr... 6317.0e-83
WP_150169455.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 6317.1e-83

PSORT result

LocalizationCertaintyPSORT said
Not Clear