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IDCP970_24150 TypeCDS
From5584134 nt length384
To5584517 aa length127
Gene pI5.86
Definitioncold-shock protein M.W (Da)13504
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3907 putative cold shock protein2431.0e-85
coelSCO4325 cspB cold shock protein B2382.0e-83
sgrSGR_3176 putative cold shock protein2432.0e-85

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CSD1'Cold-shock' DNA-binding domain3-6375.13e-21

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_055701393.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 6501.8e-86
WP_160505725.1 cold shock domain-containing protein [Streptomyces sp. BA2] ... 6484.0e-86
WP_016642928.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 6476.1e-86
WP_076685560.1 MULTISPECIES: cold-shock protein [Streptomyces] >gb 6459.7e-86
WP_116512381.1 cold-shock protein [Streptomyces sp. AcE210] >gb 6459.7e-86
WP_067284352.1 cold-shock protein [Streptomyces jeddahensis] >gb 6432.0e-85
WP_098243274.1 cold-shock protein [Streptomyces formicae] >gb 6432.1e-85
WP_055568058.1 cold-shock protein [Streptomyces atriruber] 6423.2e-85
WP_055532712.1 cold-shock protein [Streptomyces alboniger] >gb 6423.4e-85
WP_055610283.1 MULTISPECIES: cold-shock protein [Streptomyces] >lcl 6423.8e-85

PSORT result

LocalizationCertaintyPSORT said
Not Clear