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IDCP970_24270 TypeCDS
From5611551 nt length990
To5612540 aa length329
Gene pI6.88
DefinitionWD40 repeat domain-containing protein M.W (Da)34782
Note AseI frg.
SignalP v.4.0Signal peptide | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3884 putative secreted protein3841.0e-134
coelSCO4357 putative integral membrane protein3562.0e-123
sgrSGR_3121 conserved hypothetical protein3231.0e-110

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243250.1 hypothetical protein [Streptomyces formicae] >gb 12931.1e-177
WP_055568415.1 hypothetical protein [Streptomyces atriruber] 12541.1e-171
WP_150184720.1 WD40 repeat domain-containing protein [Streptomyces venezuel... 12201.4e-166
WP_165284329.1 WD40 repeat domain-containing protein [Streptomyces sp. SID1... 12194.3e-166
NEA03022.1 WD40 repeat domain-containing protein [Streptomyces sp. SID10116] 12166.9e-166
WP_150169224.1 MULTISPECIES: WD40 repeat domain-containing protein [Strepto... 12161.0e-165
WP_150221306.1 WD40 repeat domain-containing protein [Streptomyces venezuel... 12019.0e-164
WP_055532106.1 hypothetical protein [Streptomyces alboniger] >gb 11601.4e-157
WP_030787774.1 hypothetical protein [Streptomyces sp. NRRL S-920] 11522.1e-156
WP_069886428.1 hypothetical protein [Streptomyces luteocolor] 11262.0e-152

PSORT result

LocalizationCertaintyPSORT said
Not Clear