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IDCP970_24505 TypeCDS
From5666707 nt length576
To5666132 aa length191
Gene pI10.15
Definitionsigma-70 family RNA polymerase sigma factor M.W (Da)21284
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3844 putative RNA polymerase ECF-subfamily sigma factor2841.0e-99
coelSCO4409 putative RNA polymerase sigma factor2655.0e-92
sgrSGR_3060 putative RNA polymerase ECF-subfamily sigma factor1654.0e-53

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 228-9449.92.1e-13

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243205.1 sigma-70 family RNA polymerase sigma factor [Streptomyces fo... 7623.2e-101
WP_150217847.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ve... 7153.3e-94
WP_135333899.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 7146.2e-94
WP_160505670.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 7083.9e-93
WP_150184682.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ve... 7084.6e-93
WP_055697717.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 7051.1e-92
WP_062776366.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 7032.0e-92
WP_136242181.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 6998.4e-92
WP_150169154.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 6938.3e-91
WP_016645422.1 sigma-70 family RNA polymerase sigma factor [Streptomyces au... 6938.7e-91

PSORT result

LocalizationCertaintyPSORT said
Not Clear