-- | --

IDCP970_24860 TypeCDS
From5741463 nt length2370
To5743832 aa length789
Gene pI5.94
Definitiontetratricopeptide repeat protein M.W (Da)86226
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2924 hypothetical protein945.0e-24
sgrSGR_4251 hypothetical protein6690.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

TPR_82Tetratricopeptide repeat707-738, 743-77357.35.8e-16

AAA_161AAA ATPase domain13-16238.81.2e-09

TPR_162Tetratricopeptide repeat646-706, 713-77334.81.9e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
ATL28516.1 TPR repeat [Streptomyces formicae] 29820.0e+00
WP_098243160.1 tetratricopeptide repeat protein [Streptomyces formicae] 29790.0e+00
WP_079036987.1 tetratricopeptide repeat protein [Streptomyces silaceus] 25390.0e+00
WP_079144152.1 tetratricopeptide repeat protein [Streptomyces luteocolor] 25370.0e+00
WP_107097887.1 tetratricopeptide repeat protein [Streptomyces atriruber] 25140.0e+00
WP_150221314.1 tetratricopeptide repeat protein [Streptomyces venezuelae] >... 24400.0e+00
WP_150184641.1 tetratricopeptide repeat protein [Streptomyces venezuelae] 24040.0e+00
WP_125517807.1 tetratricopeptide repeat protein [Streptomyces sp. WAC 01529... 23810.0e+00
WP_161235020.1 tetratricopeptide repeat protein [Streptomyces sp. SID337] >... 23700.0e+00
WP_078594307.1 tetratricopeptide repeat protein [Streptomyces sp. NRRL S-92... 23660.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear