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IDCP970_24895 TypeCDS
From5753698 nt length858
To5752841 aa length285
Gene pI6.25
DefinitionXRE family transcriptional regulator M.W (Da)32495
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_3783 putative DNA-binding protein5450.0e+00
coelSCO4441 putative DNA-binding protein4956.0e-180
sgrSGR_4257 putative DNA-binding protein5200.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DUF57531Domain of unknown function (DUF5753)100-277204.51e-60

HTH_311Helix-turn-helix domain13-6961.47.7e-17

HTH_31Helix-turn-helix18-6745.56e-12

HTH_191Helix-turn-helix domain15-6838.97e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243154.1 helix-turn-helix domain-containing protein [Streptomyces for... 13990.0e+00
WP_055696787.1 helix-turn-helix domain-containing protein [Streptomyces sil... 13850.0e+00
WP_069886589.1 helix-turn-helix domain-containing protein [Streptomyces lut... 13820.0e+00
WP_055563121.1 helix-turn-helix domain-containing protein [Streptomyces atr... 13770.0e+00
WP_150169052.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13750.0e+00
WP_150217901.1 helix-turn-helix domain-containing protein [Streptomyces ven... 13690.0e+00
WP_160505605.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 13640.0e+00
WP_076685635.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13620.0e+00
WP_062780802.1 MULTISPECIES: helix-turn-helix domain-containing protein [un... 13560.0e+00
WP_030359360.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 13560.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear