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IDCP970_25155 TypeCDS
From5820659 nt length1227
To5821885 aa length408
Gene pI10.38
Definitiontranscription termination factor Rho M.W (Da)43584
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_1310 putative transcription termination factor5280.0e+00
coelSCO7051 putative transcription terminator factor4861.0e-172
sgrSGR_6729 putative transcription termination factor5080.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

ATP-synt_ab1ATP synthase alpha/beta family, nucleotide-binding domain136-33974.01.3e-20

Rho_RNA_bind1Rho termination factor, RNA-binding domain38-10451.38.1e-14

AAA_251AAA domain143-26130.13.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098243096.1 transcription termination factor Rho [Streptomyces formicae]... 17930.0e+00
WP_127908774.1 transcription termination factor Rho [Streptomyces huasconen... 15830.0e+00
WP_125513322.1 transcription termination factor Rho [Streptomyces sp. WAC 0... 15650.0e+00
WP_055527953.1 transcription termination factor Rho [Streptomyces alboniger... 15480.0e+00
WP_079143796.1 transcription termination factor Rho [Streptomyces luteocolo... 15440.0e+00
WP_079036752.1 transcription termination factor Rho [Streptomyces silaceus] 15410.0e+00
WP_079075212.1 transcription termination factor Rho [Streptomyces atriruber... 15200.0e+00
WP_051819733.1 transcription termination factor Rho [Streptomyces sp. NRRL ... 14960.0e+00
WP_150217924.1 transcription termination factor Rho [Streptomyces venezuela... 14810.0e+00
WP_150184610.1 transcription termination factor Rho [Streptomyces venezuela... 14780.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear