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IDCP970_26630 TypeCDS
From6161755 nt length1194
To6160562 aa length397
Gene pI9.6
Definitionwinged helix-turn-helix domain-containing protein M.W (Da)44024
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5069 hypothetical protein6260.0e+00
coelSCO3007 hypothetical protein6290.0e+00
sgrSGR_4529 conserved hypothetical protein6250.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_421Winged helix DNA-binding domain41-372205.91.2e-60

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098242889.1 YcaQ family DNA glycosylase [Streptomyces formicae] >gb 18000.0e+00
WP_127912054.1 YcaQ family DNA glycosylase [Streptomyces huasconensis] 17310.0e+00
WP_055699487.1 YcaQ family DNA glycosylase [Streptomyces silaceus] 17220.0e+00
WP_069886985.1 YcaQ family DNA glycosylase [Streptomyces luteocolor] 17210.0e+00
WP_150218176.1 winged helix DNA-binding domain-containing protein [Streptom... 17170.0e+00
WP_125513119.1 YcaQ family DNA glycosylase [Streptomyces sp. WAC 01529] >gb... 17150.0e+00
WP_062780685.1 MULTISPECIES: YcaQ family DNA glycosylase [unclassified Stre... 17130.0e+00
WP_107098144.1 YcaQ family DNA glycosylase [Streptomyces atriruber] 17120.0e+00
WP_076685846.1 MULTISPECIES: YcaQ family DNA glycosylase [Streptomyces] >gb... 17060.0e+00
WP_030794608.1 YcaQ family DNA glycosylase [Streptomyces sp. NRRL S-920] 16920.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear