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IDCP970_27140 TypeCDS
From6291444 nt length975
To6290470 aa length324
Gene pI5.46
Definitionglycine betaine ABC transporter substrate-binding protein M.W (Da)34750
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5144 putative ABC transporter substrate-binding protein5230.0e+00
coelSCO2933 putative permease binding-protein component4684.0e-168
sgrSGR_4607 putative ABC transporter solute-binding protein4361.0e-155

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC1Substrate binding domain of ABC-type glycine betaine transport system49-317194.52.3e-57

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098242808.1 glycine betaine ABC transporter substrate-binding protein [S... 16100.0e+00
WP_055702362.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 15220.0e+00
WP_160505292.1 glycine betaine ABC transporter substrate-binding protein [S... 15150.0e+00
WP_055568195.1 glycine betaine ABC transporter substrate-binding protein [S... 15110.0e+00
WP_135330840.1 glycine betaine ABC transporter substrate-binding protein [S... 14990.0e+00
WP_150218302.1 glycine betaine ABC transporter substrate-binding protein [S... 14970.0e+00
WP_055530489.1 glycine betaine ABC transporter substrate-binding protein [S... 14780.0e+00
WP_150168435.1 MULTISPECIES: glycine betaine ABC transporter substrate-bind... 14760.0e+00
WP_125513054.1 glycine betaine ABC transporter substrate-binding protein [S... 14750.0e+00
WP_030794955.1 glycine betaine ABC transporter substrate-binding protein [S... 14700.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear