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IDCP970_27885 TypeCDS
From6434536 nt length1233
To6433304 aa length410
Gene pI9.36
Definitionhelix-turn-helix domain-containing protein M.W (Da)43941
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5261 AraC-family transcriptional regulator6860.0e+00
coelSCO2792 adpA araC-family transcriptional regulator6520.0e+00
sgrSGR_4742 transcriptional regulator6440.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HTH_181Helix-turn-helix domain254-33272.23.1e-20

HTH_AraC2Bacterial regulatory helix-turn-helix proteins, AraC family243-281, 294-33156.22.3e-15

DJ-1_PfpI1DJ-1/PfpI family27-19253.82e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098242691.1 helix-turn-helix domain-containing protein [Streptomyces for... 19310.0e+00
WP_030790066.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18670.0e+00
WP_055565528.1 helix-turn-helix domain-containing protein [Streptomyces atr... 18620.0e+00
WP_055535332.1 helix-turn-helix domain-containing protein [Streptomyces alb... 18620.0e+00
WP_150184218.1 helix-turn-helix domain-containing protein [Streptomyces ven... 18540.0e+00
WP_150218516.1 helix-turn-helix domain-containing protein [Streptomyces ven... 18510.0e+00
WP_150168194.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18490.0e+00
WP_125512946.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18430.0e+00
WP_055698486.1 MULTISPECIES: helix-turn-helix domain-containing protein [St... 18290.0e+00
WP_160505173.1 helix-turn-helix domain-containing protein [Streptomyces sp.... 18000.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear