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IDCP970_28460 TypeCDS
From6563081 nt length453
To6563533 aa length150
Gene pI9.88
Definitionsingle-stranded DNA-binding protein M.W (Da)16511
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5365 putative single-strand DNA-binding protein1772.0e-58
coelSCO2683 putative single-strand DNA binding protein1757.0e-58
sgrSGR_4851 putative single-strand DNA-binding protein1503.0e-48

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SSB1Single-strand binding protein family6-10167.87.1e-19

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098242596.1 single-stranded DNA-binding protein [Streptomyces formicae] ... 6977.1e-93
WP_055566814.1 single-stranded DNA-binding protein [Streptomyces atriruber] 6064.7e-79
WP_150218600.1 single-stranded DNA-binding protein [Streptomyces venezuelae... 6056.4e-79
WP_055697024.1 MULTISPECIES: single-stranded DNA-binding protein [Streptomy... 5971.1e-77
WP_150184168.1 single-stranded DNA-binding protein [Streptomyces venezuelae... 5937.1e-77
WP_150167842.1 single-stranded DNA-binding protein [Streptomyces venezuelae... 5911.5e-76
WP_161236090.1 MULTISPECIES: single-stranded DNA-binding protein [unclassif... 5902.1e-76
WP_160505092.1 single-stranded DNA-binding protein [Streptomyces sp. BA2] >... 5873.7e-76
WP_055531667.1 single-stranded DNA-binding protein [Streptomyces alboniger]... 5717.4e-74
WP_051820108.1 single-stranded DNA-binding protein [Streptomyces sp. NRRL S... 5664.4e-73

PSORT result

LocalizationCertaintyPSORT said
Not Clear