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IDCP970_32370 TypeCDS
From7455349 nt length3543
To7458891 aa length1180
Gene pI5.65
DefinitionDNA polymerase III subunit alpha M.W (Da)131004
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6143 putative DNA polymerase III alpha subunit22490.0e+00
coelSCO2064 putative DNA polymerase III alpha chain22310.0e+00
sgrSGR_5440 putative DNA polymerase III alpha subunit22370.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_alpha1Bacterial DNA polymerase III alpha NTPase domain316-584319.91.4e-95

DNA_pol3_finger1Bacterial DNA polymerase III alpha subunit finger domain587-756197.41e-58

PHP1PHP domain8-194156.38.6e-46

HHH_61Helix-hairpin-helix motif829-91781.05.9e-23

tRNA_anti-codon1OB-fold nucleic acid binding domain1021-109729.65.1e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098241943.1 DNA polymerase III subunit alpha [Streptomyces formicae] >gb... 62250.0e+00
WP_150183621.1 DNA polymerase III subunit alpha [Streptomyces venezuelae] >... 61690.0e+00
WP_055565218.1 DNA polymerase III subunit alpha [Streptomyces atriruber] 61630.0e+00
WP_055699910.1 MULTISPECIES: DNA polymerase III subunit alpha [Streptomyces... 61530.0e+00
WP_150166777.1 DNA polymerase III subunit alpha [Streptomyces venezuelae] >... 61520.0e+00
WP_150219155.1 DNA polymerase III subunit alpha [Streptomyces venezuelae] >... 61480.0e+00
WP_161235648.1 MULTISPECIES: DNA polymerase III subunit alpha [unclassified... 61460.0e+00
WP_135330199.1 DNA polymerase III subunit alpha [Streptomyces sp. MZ04] >lc... 61450.0e+00
WP_062781207.1 MULTISPECIES: DNA polymerase III subunit alpha [Streptomyces... 61130.0e+00
WP_160504510.1 DNA polymerase III subunit alpha [Streptomyces sp. BA2] >gb 61060.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear