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IDCP970_32810 TypeCDS
From7559812 nt length2583
To7557230 aa length860
GenehrpB pI8.36
DefinitionATP-dependent helicase HrpB M.W (Da)90907
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6231 putative ATP-dependent RNA helicase11380.0e+00
coelSCO2000 putative ATP-binding RNA helicase6390.0e+00
sgrSGR_5532 putative ATP-dependent RNA helicase11090.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

HrpB_C1ATP-dependent helicase C-terminal697-831176.04.4e-52

Helicase_C1Helicase conserved C-terminal domain230-34436.93.8e-09

DEAD1DEAD/DEAH box helicase22-17128.61.1e-06

HA21Helicase associated domain (HA2)408-47126.27.5e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098241871.1 ATP-dependent helicase HrpB [Streptomyces formicae] >gb 31860.0e+00
WP_150166639.1 ATP-dependent helicase HrpB [Streptomyces venezuelae] >gb 29060.0e+00
WP_161235147.1 ATP-dependent helicase HrpB [Streptomyces sp. SID337] >gb 28960.0e+00
WP_150183549.1 ATP-dependent helicase HrpB [Streptomyces venezuelae] >gb 28830.0e+00
WP_150221472.1 ATP-dependent helicase HrpB [Streptomyces venezuelae] >gb 27760.0e+00
WP_160504429.1 ATP-dependent helicase HrpB [Streptomyces sp. BA2] >gb 27640.0e+00
WP_076686791.1 MULTISPECIES: ATP-dependent helicase HrpB [Streptomyces] >gb... 27570.0e+00
WP_150476722.1 ATP-dependent helicase HrpB [Streptomyces alboniger] >gb 27570.0e+00
WP_136241827.1 ATP-dependent helicase HrpB [Streptomyces sp. A1499] >lcl 27480.0e+00
WP_062780335.1 ATP-dependent helicase HrpB [Streptomyces sp. NRRL S-1521] >... 27380.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear