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IDCP970_33215 TypeCDS
From7641187 nt length1002
To7642188 aa length333
GenewhiA pI10.18
DefinitionDNA-binding protein WhiA M.W (Da)35538
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6294 putative sporulation regulatory protein5410.0e+00
coelSCO1950 hypothetical protein5110.0e+00
sgrSGR_5572 putative WhiA protein5150.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

WhiA_N1WhiA N-terminal LAGLIDADG-like domain20-10492.41.4e-26

LAGLIDADG_WhiA1WhiA LAGLIDADG-like domain127-21886.78.6e-25

HTH_WhiA1WhiA C-terminal HTH domain221-30371.17.9e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098241804.1 DNA-binding protein WhiA [Streptomyces formicae] >gb 13530.0e+00
WP_135329447.1 DNA-binding protein WhiA [Streptomyces sp. MZ04] >lcl 13280.0e+00
WP_055702095.1 MULTISPECIES: DNA-binding protein WhiA [Streptomyces] 13280.0e+00
WP_150166515.1 MULTISPECIES: DNA-binding protein WhiA [Streptomyces] >gb 13150.0e+00
WP_150219285.1 DNA-binding protein WhiA [Streptomyces venezuelae] >gb 13102.2e-180
WP_055566779.1 DNA-binding protein WhiA [Streptomyces atriruber] 13093.8e-180
WP_160504363.1 DNA-binding protein WhiA [Streptomyces sp. BA2] >gb 13076.8e-180
WP_125512081.1 DNA-binding protein WhiA [Streptomyces sp. WAC 01529] >gb 13068.9e-180
WP_030784145.1 MULTISPECIES: DNA-binding protein WhiA [Streptomyces] >gb 13007.2e-179
WP_138959085.1 MULTISPECIES: DNA-binding protein WhiA [unclassified Strepto... 13001.0e-178

PSORT result

LocalizationCertaintyPSORT said
Not Clear