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IDCP970_33490 TypeCDS
From7694693 nt length555
To7695247 aa length184
Gene pI9.56
DefinitionSigE family RNA polymerase sigma factor M.W (Da)20284
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6340 putative RNA polymerase ECF-subfamily sigma factor2833.0e-99
sgrSGR_2241 putative RNA polymerase ECF-subfamily sigma factor1042.0e-29

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r4_21Sigma-70, region 4105-15560.21.2e-16

Sigma70_r41Sigma-70, region 4108-15654.65.5e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098247140.1 SigE family RNA polymerase sigma factor [Streptomyces formic... 8949.1e-122
WP_127910328.1 SigE family RNA polymerase sigma factor [Streptomyces huasco... 7654.5e-102
WP_125517430.1 SigE family RNA polymerase sigma factor [Streptomyces sp. WA... 7621.1e-101
WP_030784241.1 SigE family RNA polymerase sigma factor [Streptomyces sp. NR... 7621.3e-101
WP_055533699.1 SigE family RNA polymerase sigma factor [Streptomyces alboni... 7551.4e-100
WP_150219312.1 SigE family RNA polymerase sigma factor [Streptomyces venezu... 7551.6e-100
WP_150183458.1 SigE family RNA polymerase sigma factor [Streptomyces venezu... 7551.8e-100
WP_062771724.1 MULTISPECIES: SigE family RNA polymerase sigma factor [uncla... 7509.2e-100
WP_055698066.1 SigE family RNA polymerase sigma factor [Streptomyces silace... 7491.3e-99
WP_150166462.1 MULTISPECIES: SigE family RNA polymerase sigma factor [Strep... 7472.7e-99

PSORT result

LocalizationCertaintyPSORT said
Not Clear