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IDCP970_34395 TypeCDS
From7880965 nt length1479
To7882443 aa length492
Gene pI5.13
Definitionribosome biogenesis GTPase Der M.W (Da)53319
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6524 putative GTP-binding protein8970.0e+00
coelSCO1758 putative GTP binding protein9070.0e+00
sgrSGR_5741 putative GTP-binding protein8720.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

MMR_HSR1250S ribosome-binding GTPase57-171, 231-349160.31.6e-47

KH_dom-like1KH-domain-like of EngA bacterial GTPase enzymes, C-terminal405-48390.37.6e-26

FeoB_N2Ferrous iron transport protein B57-173, 231-39487.27.8e-25

GTP_EFTU2Elongation factor Tu GTP binding domain57-177, 305-39771.09.4e-20

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098241622.1 ribosome biogenesis GTPase Der [Streptomyces formicae] >gb 20590.0e+00
WP_076686949.1 MULTISPECIES: ribosome biogenesis GTPase Der [Streptomyces] ... 20430.0e+00
WP_062782721.1 MULTISPECIES: ribosome biogenesis GTPase Der [unclassified S... 20390.0e+00
WP_055562998.1 ribosome biogenesis GTPase Der [Streptomyces atriruber] 20380.0e+00
WP_150166182.1 ribosome biogenesis GTPase Der [Streptomyces venezuelae] >gb... 20350.0e+00
WP_055536414.1 ribosome biogenesis GTPase Der [Streptomyces alboniger] >gb 20340.0e+00
WP_150183322.1 ribosome biogenesis GTPase Der [Streptomyces venezuelae] >gb... 20330.0e+00
WP_161235367.1 MULTISPECIES: ribosome biogenesis GTPase Der [unclassified S... 20320.0e+00
WP_125511853.1 ribosome biogenesis GTPase Der [Streptomyces sp. WAC 01529] ... 20310.0e+00
WP_030790781.1 ribosome biogenesis GTPase Der [Streptomyces sp. NRRL S-920] 20310.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear