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IDCP970_34580 TypeCDS
From7924935 nt length3441
To7928375 aa length1146
GenednaE pI7.12
DefinitionDNA polymerase III subunit alpha M.W (Da)123669
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6555 putative DNA polymerase III alpha subunit19100.0e+00
coelSCO1739 putative DNA polymerase III alpha chain18460.0e+00
sgrSGR_6691 putative DNA polymerase III alpha subunit11080.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_pol3_alpha1Bacterial DNA polymerase III alpha NTPase domain341-580242.84.4e-72

DNA_pol3_finger1Bacterial DNA polymerase III alpha subunit finger domain585-729153.04.4e-45

HHH_61Helix-hairpin-helix motif818-91068.54.7e-19

PHP1PHP domain6-17663.33.4e-17

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098241590.1 DNA polymerase III subunit alpha [Streptomyces formicae] >gb... 54080.0e+00
WP_055698388.1 DNA polymerase III subunit alpha [Streptomyces silaceus] 52340.0e+00
WP_069886251.1 DNA polymerase III subunit alpha [Streptomyces luteocolor] 52310.0e+00
WP_125511830.1 DNA polymerase III subunit alpha [Streptomyces sp. WAC 01529... 51070.0e+00
WP_135331389.1 DNA polymerase III subunit alpha [Streptomyces sp. MZ04] >lc... 50970.0e+00
WP_160504165.1 DNA polymerase III subunit alpha [Streptomyces sp. BA2] >gb 50730.0e+00
WP_150166120.1 MULTISPECIES: DNA polymerase III subunit alpha [Streptomyces... 50590.0e+00
WP_150219493.1 DNA polymerase III subunit alpha [Streptomyces venezuelae] >... 50580.0e+00
WP_150183296.1 DNA polymerase III subunit alpha [Streptomyces venezuelae] >... 50180.0e+00
WP_076686961.1 MULTISPECIES: DNA polymerase III subunit alpha [Streptomyces... 49750.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear