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IDCP970_35975 TypeCDS
From8232987 nt length546
To8233532 aa length181
Gene pI4.84
Definitionsigma-70 family RNA polymerase sigma factor M.W (Da)19691
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6785 putative RNA polymerase ECF-subfamily sigma factor1828.0e-60
coelSCO1564 putative RNA polymerase sigma factor1727.0e-56
sgrSGR_5974 putative RNA polymerase ECF-subfamily sigma factor1352.0e-41

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result

no hits.

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_125511620.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 6472.2e-84
WP_098241352.1 sigma-70 family RNA polymerase sigma factor [Streptomyces fo... 6454.4e-84
WP_030783130.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 6309.2e-82
WP_055530050.1 sigma-70 family RNA polymerase sigma factor [Streptomyces al... 6282.2e-81
WP_150219709.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ve... 6212.7e-80
WP_055697475.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [S... 6109.7e-79
WP_150165729.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ve... 6082.4e-78
WP_161235649.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 6012.2e-77
WP_150182944.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ve... 5961.7e-76
WP_136241338.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 5771.1e-73

PSORT result

LocalizationCertaintyPSORT said
Not Clear