-- | --

IDCP970_36475 TypeCDS
From8334020 nt length273
To8334292 aa length90
Gene pI4.38
DefinitionDNA-directed RNA polymerase subunit omega M.W (Da)9751
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_6872 RNA polymerase omega subunit1757.0e-60
coelSCO1478 putative RNA polymerase omega subunit1772.0e-60
sgrSGR_6056 putative RNA polymerase omega subunit1772.0e-60

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

RNA_pol_Rpb61RNA polymerase Rpb618-8055.44.3e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_030810584.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4574.1e-58
WP_030493615.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4557.1e-58
WP_009187588.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4531.7e-57
WP_164264569.1 DNA-directed RNA polymerase subunit omega [Streptomyces sp. ... 4521.7e-57
WP_005319902.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4522.1e-57
WP_018564174.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4512.7e-57
WP_114056739.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4512.7e-57
WP_003982715.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4512.9e-57
WP_016572365.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4504.4e-57
WP_017242218.1 MULTISPECIES: DNA-directed RNA polymerase subunit omega [Str... 4504.6e-57

PSORT result

LocalizationCertaintyPSORT said
Not Clear