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IDCP970_40800 TypeCDS
From9410423 nt length891
To9411313 aa length296
Gene pI5.04
DefinitionRNA polymerase sigma-70 factor M.W (Da)32668
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7068 putative RNA polymerase ECF-subfamily sigma factor4541.0e-163
coelSCO1263 putative ECF-sigma factor4262.0e-152
sgrSGR_6264 putative RNA polymerase ECF-subfamily sigma factor3995.0e-142

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 210-7362.91.8e-17

Sigma70_r4_21Sigma-70, region 4112-16248.45.6e-13

Sigma70_r41Sigma-70, region 4116-16230.32.2e-07

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098240549.1 RNA polymerase sigma-70 factor [Streptomyces formicae] 13300.0e+00
ATL25435.1 putative ECF-sigma factor [Streptomyces formicae] 13200.0e+00
WP_076687462.1 MULTISPECIES: RNA polymerase sigma-70 factor [Streptomyces] ... 11549.9e-158
WP_079107348.1 MULTISPECIES: RNA polymerase sigma-70 factor [unclassified S... 11531.4e-157
WP_030676773.1 RNA polymerase sigma-70 factor [Streptomyces sp. NRRL B-1347... 11522.4e-157
WP_055528181.1 RNA polymerase sigma-70 factor [Streptomyces alboniger] >gb 11487.5e-157
WP_150509654.1 RNA polymerase sigma-70 factor [Streptomyces spectabilis] >g... 11443.3e-156
WP_127910183.1 RNA polymerase sigma factor SigJ [Streptomyces huasconensis] 11434.6e-156
WP_055697014.1 MULTISPECIES: RNA polymerase sigma-70 factor [Streptomyces] 11401.4e-155
WP_144001962.1 RNA polymerase sigma-70 factor [Streptomyces spectabilis] >g... 11373.7e-155

PSORT result

LocalizationCertaintyPSORT said
Not Clear