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IDCP970_41620 TypeCDS
From9599342 nt length2331
To9601672 aa length776
GenesecD pI10.07
Definitionprotein translocase subunit SecD M.W (Da)81114
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
coelSCO6160 putative SecDF protein-export membrane protein8790.0e+00
sgrSGR_1134 protein-export membrane protein SecD8500.0e+00

*coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SecD_SecF2Protein export membrane protein262-426, 554-738262.12.1e-78

Sec_GG2SecD/SecF GG Motif29-46, 487-51143.11.9e-11

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098240401.1 protein translocase subunit SecD [Streptomyces formicae] >gb... 30670.0e+00
WP_055563877.1 protein translocase subunit SecD [Streptomyces atriruber] 28360.0e+00
WP_125510774.1 protein translocase subunit SecD [Streptomyces sp. WAC 01529... 28140.0e+00
WP_055697956.1 MULTISPECIES: protein translocase subunit SecD [Streptomyces... 28080.0e+00
WP_150181936.1 protein translocase subunit SecD [Streptomyces venezuelae] >... 27920.0e+00
WP_150220613.1 protein translocase subunit SecD [Streptomyces venezuelae] >... 27880.0e+00
WP_150164042.1 protein translocase subunit SecD [Streptomyces venezuelae] >... 27850.0e+00
WP_161238063.1 MULTISPECIES: protein translocase subunit SecD [unclassified... 27820.0e+00
WP_031155033.1 protein translocase subunit SecD [Streptomyces xanthophaeus] 27790.0e+00
WP_051902287.1 protein translocase subunit SecD [Streptomyces xanthophaeus] 27570.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear