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IDCP970_41670 TypeCDS
From9612247 nt length1590
To9610658 aa length529
Gene pI8.62
Definitionsigma-70 family RNA polymerase sigma factor M.W (Da)55794
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_2597 putative RNA polymerase ECF-subfamily sigma factor2701.0e-83
sgrSGR_313 putative RNA polymerase ECF-subfamily sigma factor5250.0e+00

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

CAP1Cysteine-rich secretory protein family411-52581.21.1e-22

Sigma70_r21Sigma-70 region 224-9052.72.8e-14

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098240392.1 sigma-70 family RNA polymerase sigma factor [Streptomyces fo... 11714.5e-153
ATL25256.1 Putative RNA polymerase ECF-subfamily sigma factor [Streptomyces ... 11341.5e-147
WP_150220674.1 sigma-70 family RNA polymerase sigma factor [Streptomyces ve... 10054.1e-128
WP_107409929.1 sigma-70 family RNA polymerase sigma factor [Streptomyces lu... 10021.3e-127
WP_107102016.1 sigma-70 family RNA polymerase sigma factor [Streptomyces si... 10021.3e-127
WP_165284221.1 sigma-70 family RNA polymerase sigma factor, partial [Strept... 9712.6e-126
NEA00492.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp. SID... 9713.2e-126
WP_150476491.1 sigma-70 family RNA polymerase sigma factor [Streptomyces al... 9891.3e-125
WP_106976995.1 sigma-70 family RNA polymerase sigma factor [Streptomyces sp... 9855.7e-125
WP_161234929.1 MULTISPECIES: sigma-70 family RNA polymerase sigma factor [u... 9802.6e-124

PSORT result

LocalizationCertaintyPSORT said
Not Clear