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IDCP970_42320 TypeCDS
From9776456 nt length1152
To9777607 aa length383
Gene pI6.07
DefinitionRNA polymerase subunit sigma-24 M.W (Da)41887
Note AseI frg.
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_961 putative RNA polymerase ECF-subfamily sigma factor5970.0e+00
coelSCO4452 hypothetical protein5550.0e+00
sgrSGR_6932 putative RNA polymerase ECF-subfamily sigma factor5630.0e+00

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Sigma70_r21Sigma-70 region 29-6834.91e-08

Sigma70_r4_21Sigma-70, region 498-14833.42.6e-08

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_098246982.1 RNA polymerase subunit sigma-24 [Streptomyces formicae] >gb 12911.0e-175
WP_067038865.1 RNA polymerase subunit sigma-24 [Streptomyces sp. FXJ1.172] ... 12136.2e-164
WP_087883295.1 RNA polymerase subunit sigma-24 [Streptomyces alboflavus] >g... 12083.3e-163
WP_100830106.1 RNA polymerase subunit sigma-24 [Streptomyces sp. 69] >gb 12083.8e-163
WP_147245721.1 RNA polymerase subunit sigma-24 [Streptomyces sp. ISID311] >... 12084.3e-163
WP_061917387.1 RNA polymerase subunit sigma-24 [Streptomyces bungoensis] >g... 12074.9e-163
WP_053557422.1 RNA polymerase subunit sigma-24 [Streptomyces pristinaespira... 12041.4e-162
WP_030176129.1 RNA polymerase sigma24 factor [Streptomyces sp. NRRL S-813] 12031.9e-162
WP_030360456.1 MULTISPECIES: RNA polymerase sigma24 factor [Streptomyces] 12022.6e-162
WP_111488918.1 RNA polymerase subunit sigma-24 [Streptacidiphilus bronchial... 12014.4e-162

PSORT result

LocalizationCertaintyPSORT said
Not Clear