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IDSACE_0005 TypeCDS
From5261 nt length1176
To6436 aa length391
GenerecF pI6.27
DefinitionDNA replication and repair protein M.W (Da)42447
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4319 putative DNA recombination and repair protein4492.0e-127
coelSCO3876 recF DNA replication protein4178.0e-118
sgrSGR_3703 putative DNA recombination and repair protein4518.0e-128
scabSCAB45791 putative DNA recombination and repair protein4562.0e-129
saceSCAB45791 putative DNA recombination and repair protein4562.0e-129
nfarnfa30 putative recombination and repair protein3831.0e-107

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

SMC_N1RecF/RecN/SMC N terminal domain2-36769.03.6e-19

AAA_231AAA domain6-5327.82.9e-06

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009945690.1 DNA replication and repair protein RecF [Saccharopolyspora e... 16490.0e+00
WP_010313213.1 DNA replication and repair protein RecF [Saccharopolyspora s... 14170.0e+00
WP_093419569.1 DNA replication/repair protein RecF [Saccharopolyspora flava... 13770.0e+00
WP_093150681.1 DNA replication/repair protein RecF [Saccharopolyspora antim... 13560.0e+00
WP_093350839.1 DNA replication/repair protein RecF [Saccharopolyspora jiang... 13550.0e+00
SFN22331.1 DNA replication and repair protein RecF [Saccharopolyspora antim... 13490.0e+00
WP_029720505.1 DNA replication and repair protein RecF [Saccharopolyspora r... 13270.0e+00
WP_093260830.1 DNA replication/repair protein RecF [Saccharopolyspora shand... 13151.9e-179
SDW29367.1 DNA replication and repair protein RecF [Saccharopolyspora shand... 13083.9e-178
WP_025353674.1 DNA replication and repair protein RecF [Kutzneria albida] >... 12942.2e-176

PSORT result

LocalizationCertaintyPSORT said
Not Clear