-- | --

IDSACE_0080 TypeCDS
From102966 nt length996
To103961 aa length331
Gene pI4.82
Definitionpossible glycine betaine/carnitine/choline binding protein precursor M.W (Da)35860
Note AseI frg.B
SignalP v.4.0Signal peptide | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_5144 putative ABC transporter substrate-binding protein3016.0e-83
coelSCO2933 putative permease binding-protein component2689.0e-73
sgrSGR_4607 putative ABC transporter solute-binding protein2718.0e-74
nfarnfa30790 putative transporter3049.0e-84

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

OpuAC1Substrate binding domain of ABC-type glycine betaine transport system49-317201.61.5e-59

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
CAL99433.1 possible glycine betaine/carnitine/choline binding protein precu... 17420.0e+00
WP_009949863.1 glycine/betaine ABC transporter substrate-binding protein [S... 16750.0e+00
SDW27484.1 osmoprotectant transport system substrate-binding protein [Sacch... 13340.0e+00
WP_093261095.1 glycine/betaine ABC transporter substrate-binding protein [S... 12993.6e-179
SFN21197.1 osmoprotectant transport system substrate-binding protein [Sacch... 12841.2e-176
SEG84528.1 osmoprotectant transport system substrate-binding protein [Sacch... 12841.3e-176
WP_093419482.1 glycine/betaine ABC transporter substrate-binding protein [S... 12571.3e-172
WP_093351203.1 glycine/betaine ABC transporter substrate-binding protein [S... 12542.8e-172
WP_093151480.1 glycine/betaine ABC transporter substrate-binding protein [S... 12533.9e-172
WP_051388128.1 glycine/betaine ABC transporter substrate-binding protein [S... 12528.3e-172

PSORT result

LocalizationCertaintyPSORT said
Not Clear