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IDSACE_0117 TypeCDS
From144878 nt length843
To145720 aa length280
Gene pI6.38
Definitionresponse regulator, two-component system M.W (Da)30888
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7115 putative regulatory protein2124.0e-56
coelSCO1220 putative regulatory protein2093.0e-55
sgrSGR_723 putative two-component system response regulator2132.0e-56
scabSCAB78501 putative regulatory protein2216.0e-59
saceSCAB78501 putative regulatory protein2216.0e-59
nfarnfa17970 putative two-component system response regulator2392.0e-64

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

LytTR1LytTr DNA-binding domain170-26581.05.5e-23

Response_reg1Response regulator receiver domain12-13355.93.8e-15

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_011872949.1 DNA-binding response regulator [Saccharopolyspora erythraea]... 13740.0e+00
WP_083822229.1 DNA-binding response regulator [Saccharopolyspora spinosa] 11603.2e-159
WP_093419437.1 DNA-binding response regulator [Saccharopolyspora flava] 11498.5e-158
WP_093150465.1 DNA-binding response regulator [Saccharopolyspora antimicrob... 11471.8e-157
WP_093260706.1 DNA-binding response regulator [Saccharopolyspora shandongen... 11452.7e-157
WP_093351001.1 DNA-binding response regulator [Saccharopolyspora jiangxiens... 11445.4e-157
SFN20517.1 DNA-binding response regulator, LytR/AlgR family [Saccharopolysp... 10835.0e-148
SDW26179.1 two component transcriptional regulator, LytTR family [Saccharop... 10825.6e-148
SEG84323.1 two component transcriptional regulator, LytTR family [Saccharop... 10801.5e-147
SFS84276.1 two component transcriptional regulator, LytTR family [Saccharop... 10627.6e-145

PSORT result

LocalizationCertaintyPSORT said
Not Clear