-- | --

IDSACE_0754 TypeCDS
From847294 nt length237
To847058 aa length78
GenerpmB pI12.34
Definition50S ribosomal protein L28 M.W (Da)9234
Note AseI frg.B
SignalP v.4.0Non-secretory protein | plot Category


Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_4642 putative ribosomal protein L28972.0e-22
sgrSGR_545 putative 50S ribosomal protein L281104.0e-26
scabSCAB40011 putative ribosomal protein L28974.0e-22
saceSCAB40011 putative ribosomal protein L28974.0e-22
nfarnfa49750 putative ribosomal protein L281002.0e-23

*avm, Streptomyces avermitilis; sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

Ribosomal_L281Ribosomal L28 family4-6190.84.3e-26

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009950114.1 50S ribosomal protein L28 [Saccharopolyspora erythraea] >emb... 3995.3e-50
WP_029720720.1 50S ribosomal protein L28 [Saccharopolyspora rectivirgula] >... 3543.7e-43
WP_093265821.1 50S ribosomal protein L28 [Saccharopolyspora shandongensis] ... 3405.1e-41
WP_086780704.1 50S ribosomal protein L28 [Crossiella equi] 3405.5e-41
WP_010316402.1 50S ribosomal protein L28 [Saccharopolyspora spinosa] 3405.8e-41
WP_025354353.1 50S ribosomal protein L28 [Kutzneria albida] >gb 3337.2e-40
WP_086820092.1 50S ribosomal protein L28 [Allokutzneria sp. NRRL B-24872] 3302.1e-39
WP_007320246.1 50S ribosomal protein L28 [Gordonia araii] >dbj 3268.7e-39
WP_030427000.1 50S ribosomal protein L28 [Allokutzneria albata] >emb 3269.0e-39
WP_093155829.1 MULTISPECIES: 50S ribosomal protein L28 [Saccharopolyspora] ... 3251.1e-38

PSORT result

LocalizationCertaintyPSORT said
Not Clear