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IDSACE_0911 TypeCDS
From1020589 nt length1533
To1022121 aa length510
Gene pI5.15
DefinitionDNA ligase I, ATP-dependent (dnl1) M.W (Da)55008
Note AseI frg.H
SignalP v.4.0Non-secretory protein | plot Category

Orthologs (if any)

Bacteria*Reciprocally best hit toScoreE-value
avmSAVERM_7136 putative DNA ligase4241.0e-119
coelSCO1202 putative DNA ligase3888.0e-109
sgrSGR_6320 putative DNA ligase4126.0e-116
scabSCAB78681 putative DNA ligase4262.0e-120
saceSCAB78681 putative DNA ligase4262.0e-120
nfarnfa52520 putative ATP-dependent DNA ligase5515.0e-158

*avm, Streptomyces avermitilis; coel, Streptomyces coelicolor A3(2); sgr, Streptomyces griseus IFO13350; scab, Streptomyces scabies 87.22; sace, Saccharopolyspora erythraea NRRL2338; nfar, Nocardia farcinica IFM 10152;

Pfam search result



ModelNo.DescriptionPosition (aa)ScoreE-value

DNA_ligase_A_M1ATP dependent DNA ligase domain188-375149.68.1e-44

DNA_ligase_A_N1DNA ligase N terminus70-14049.74.6e-13

DNA_ligase_A_C1ATP dependent DNA ligase C terminal region395-48641.91e-10

BLAST search result (top 10 hits)

ID DescriptionScoreE-value
WP_009950482.1 ATP-dependent DNA ligase [Saccharopolyspora erythraea] >sp 22340.0e+00
WP_093266044.1 ATP-dependent DNA ligase [Saccharopolyspora shandongensis] >... 18150.0e+00
WP_010694288.1 ATP-dependent DNA ligase [Saccharopolyspora spinosa] 18030.0e+00
WP_093152855.1 ATP-dependent DNA ligase [Saccharopolyspora antimicrobica] >... 16920.0e+00
WP_093349420.1 ATP-dependent DNA ligase [Saccharopolyspora jiangxiensis] >e... 16600.0e+00
WP_029721697.1 ATP-dependent DNA ligase [Saccharopolyspora rectivirgula] >g... 16390.0e+00
WP_093415135.1 ATP-dependent DNA ligase [Saccharopolyspora flava] 16160.0e+00
SFS54625.1 DNA ligase-1 [Saccharopolyspora flava] 16050.0e+00
WP_084429648.1 ATP-dependent DNA ligase [Kibdelosporangium aridum] >emb 15160.0e+00
WP_016883012.1 ATP-dependent DNA ligase [Rhodococcus sp. DK17] 15080.0e+00

PSORT result

LocalizationCertaintyPSORT said
Not Clear